ZFIN ID: ZDB-GENE-040426-1696
Gene Name: BCL6A transcription repressor a
Gene Symbol: bcl6aa
Sequence Ontology ID : SO:0000704

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Previous Names: bcl6, bcl6a, zgc:73162

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [MGC:73162]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7042 Point Mutation Unknown Premature Stop ENU
sa45253 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 3 figures from Lee et al., 2013
    Observed in:
    DISEASE ASSOCIATED WITH bcl6aa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Lymphoma, B-cell
    DISEASE ASSOCIATED WITH bcl6aa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina morphogenesis in camera-type eye (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000210 (1)
  • InterPro:IPR011333 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50097 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • Pfam:PF00651 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bcl6a-001 (1) 2314
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bcl6aa No data available
    MARKER RELATIONSHIPS
    bcl6aaContained in: [BAC] CH73-14H10 (1) (order this), DKEYP-30B3 (1)
    bcl6aaEncodes: [EST] wz13247 (1)
    [cDNA] MGC:73162 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200734 (1) 2277bp
    Genomic GenBank:CR847938 169257bp
    Select Tool
    Polypeptide UniProtKB:F1R5N6 (1) 718aa
    Sequence Clusters UniGene:28218 (1)
    Sequence Information (all 21)
    OTHER bcl6aa GENE PAGES
  • Alliance (1)
  • Gene:393707 (1)
  • VEGA:OTTDARG00000034646 (1)
  • ORTHOLOGY for bcl6aa (Chr: 6)
    CITATIONS (25)