ZFIN ID: ZDB-GENE-040426-1686
Gene Name: COP9 signalosome subunit 5
Gene Symbol: cops5
Sequence Ontology ID : SO:0000704

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Previous Names: jab1 (1), zgc:73130 (1)

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: Fig. 1 from Weber et al., 2017
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 2 figures from Weber et al., 2017
Observed in:
DISEASE ASSOCIATED WITH cops5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cops5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process vestibular receptor cell development (more)
Cellular Component cytosol (more)
Molecular Function hydrolase activity (more)
GO Terms (all 18)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000555 (1)
  • InterPro:IPR037518 (1)
  • InterPro:IPR037740 (1)
  • PROSITE:PS50249 (1)
  • Pfam:PF01398 (1)
  • EC:3.4.-.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cops5-001 (1) 1387
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cops5 No data available
    MARKER RELATIONSHIPS
    cops5Contained in: [BAC] CH211-153D8 (1) (order this)
    cops5Encodes: [EST] IMAGE:7142720 (1) (order this)
    [cDNA] MGC:73130 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200725 (1) 1358bp
    Genomic GenBank:BX640462 (1) 173882bp
    Select Tool
    Polypeptide UniProtKB:Q6PC30 (1) 334aa
    Sequence Clusters UniGene:81074 (1)
    Sequence Information (all 11)
    OTHER cops5 GENE PAGES
  • Alliance (1)
  • Gene:393698 (1)
  • VEGA:OTTDARG00000021349 (1)
  • Ensembl(GRCz11):ENSDARG00000057624 (2)
  • ORTHOLOGY for cops5 (Chr: 24)
    CITATIONS (25)