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ZIRC
ZFIN ID: ZDB-GENE-040426-1663
Gene Name: calcium and integrin binding family member 2
Gene Symbol: cib2
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:73079

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity. Involved in camera-type eye development; mechanosensory behavior; and neuromast development. Human ortholog(s) of this gene implicated in Usher  ...
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2004 [MGC:73079]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH cib2 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal recessive nonsyndromic deafness 48 Deafness, autosomal recessive 48 609439
Usher syndrome type 1J Usher syndrome, type IJ 614869
DISEASE ASSOCIATED WITH cib2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process camera-type eye development (more)
Molecular Function calcium ion binding (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA cib2-201 (1) 1539
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM cib2 No data available
MARKER RELATIONSHIPS
cib2Contained in: [BAC] CH73-295D16 (1) (order this), DKEY-21I6 (1) (order this), DKEY-200J6 (1) (order this)
cib2Encodes: [cDNA] MGC:73079 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200706 (1) 1558bp
Genomic GenBank:CR381664 (1) 277093bp Blast at MegaBLAST
Polypeptide UniProtKB:Q6PC72 (1) 187aa
Sequence Clusters UniGene:82904 (1)
Sequence Information (all 13)
ORTHOLOGY for cib2 (Chr: 25)
CITATIONS (15)