cpdp

ID

ZDB-GENE-040426-1644

Name

CPD photolyase

Symbol

cpdp Nomenclature History

Previous Names

cpd-phr (1)
zgc:66475

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable deoxyribodipyrimidine photo-lyase activity. Predicted to be involved in photoreactive repair. Predicted to act upstream of or within DNA repair.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:66475 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cpdp Human Ortholog

No data available

Associated With cpdp Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR032673	DNA photolyase class 2, conserved site
Domain	IPR006050	DNA photolyase, N-terminal
Family	IPR008148	DNA photolyase class 2
Family	IPR052219	DNA Photolyase Class-2
Homologous_superfamily	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
Homologous_superfamily	IPR036134	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily
Homologous_superfamily	IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M2BFQ9	InterPro	534
UniProtKB:A0A8M9QL97	InterPro	362
UniProtKB:A0A8M9QL92	InterPro	439
UniProtKB:A0A0R4IS22	InterPro	526
UniProtKB:Q7SYI9	InterPro	516
UniProtKB:A0A8M9QH84	InterPro	370