ZFIN ID: ZDB-GENE-040426-1640
Gene Name: zgc:66440
Gene Symbol: zgc:66440
Sequence Ontology ID : SO:0000704

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Previous Names: fi25g12, wu:fi25g12

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity; predicted to be involved in Notch signaling pathway and protein ubiquitination; orthologous to human DTX3 (deltex E3 ubiquitin ligase 3).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66440]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37726 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:66440 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:66440 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Notch signaling pathway (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001841 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR039396 (1)
  • InterPro:IPR039398 (1)
  • InterPro:IPR039399 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS50089 (1)
  • Pfam:PF18102 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:66440-201 (1) 2585
    zgc:66440-202 (1) 2449
    zgc:66440-203 (1) 566
    zgc:66440-204 (1) 807
    zgc:66440-205 (1) 614
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:66440 No data available
    MARKER RELATIONSHIPS
    zgc:66440Contained in: [BAC] DKEY-157G16 (1) (order this)
    zgc:66440Encodes: [EST] fi25g12
    [cDNA] MGC:66440 (1) (order this), MGC:109734 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200528 (1) 2469bp
    Genomic GenBank:CR354433 (1) 205769bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QUJ1 (1) 384aa
    Sequence Clusters UniGene:51201 (1)
    Sequence Information (all 34)
    OTHER zgc:66440 GENE PAGES
  • Alliance (1)
  • Gene:393500 (1)
  • VEGA:OTTDARG00000028612 (1)
  • ORTHOLOGY for zgc:66440 (Chr: 23)
    CITATIONS (12)