ZFIN ID: ZDB-GENE-040426-1606
Gene Name: zgc:66313
Gene Symbol: zgc:66313    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have alpha-amylase activity; alpha-amylase activity (releasing maltohexaose); and cation binding activity. Involved in cellular response to estrogen stimulus. Is expressed in digestive system; endocrine system; gut; lens; and pancreas. Orthologous to human AMY1C (amylase alpha 1C); AMY2A (amylase alpha 2A); and AMY2B (amylase alpha 2B).
Genome Resources: Alliance (1),  Gene:393400 (1),  Ensembl(GRCz11):ENSDARG00000030357 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 13 figures from 3 publications
Directly Submitted Expression Data: 3 figures (3 images) from Thisse et al., 2004 [MGC:66313]
  9 figures (5 images) from Rauch et al., 2003 [fb63b03]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10462 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa28917 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:66313 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:66313 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to estrogen stimulus (more)
    Molecular Function alpha-amylase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:66313-201 (1)    Ensembl 942
    zgc:66313-203 (1)    Ensembl 927
    zgc:66313-204 (1)    Ensembl 1623
    zgc:66313-205 (1)    Ensembl 870
    zgc:66313-206 (1)    Ensembl 261
    zgc:66313-208 (1)    Ensembl 444
    ncRNA zgc:66313-004 (1)    Ensembl 815
    zgc:66313-006 (1)    Ensembl 998
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:66313 No data available
    MARKER RELATIONSHIPS
    zgc:66313 Contained in: [BAC] RP71-40K24 (1)
    zgc:66313 Encodes: [EST] fb63b03 (1) (order this)
    [cDNA] MGC:66313 (1), MGC:192844 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200428 (1) 1645 nt
    Genomic GenBank:BX465227 (1) 161395 nt
    Select Tool
    Polypeptide UniProtKB:F1RD28 (1) 517 aa
    Sequence Information (all 25)
    ORTHOLOGY for zgc:66313 ( Chr: 17 )
    CITATIONS (20)