ZFIN ID: ZDB-GENE-040426-1581
Gene Name: ring finger protein 25
Gene Symbol: rnf25
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:66260 (1)

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Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66260]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17475 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31339 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf761 Unknown Unknown Unknown CRISPR
    PHENOTYPE
    Data: Fig. 3 from Gao et al., 2016
    Observed in:
    DISEASE ASSOCIATED WITH rnf25 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rnf25 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of canonical Wnt signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001841 (1)
  • InterPro:IPR006575 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR016135 (1)
  • InterPro:IPR039133 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50908 (1)
  • Pfam:PF05773 (1)
  • Pfam:PF17123 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rnf25-001 (1) 1708
    ncRNA rnf25-002 (1) 844
    rnf25-003 (1) 203
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rnf25 No data available
    MARKER RELATIONSHIPS
    rnf25Contained in: [BAC] DKEY-16L2 (1) (order this)
    rnf25Encodes: [cDNA] MGC:66260 (1) (order this), MGC:174511 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201183 (1) 1778bp
    Genomic GenBank:BX571714 (1) 240105bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QPW9 (1) 513aa
    Sequence Clusters UniGene:83619 (1)
    Sequence Information (all 16)
    OTHER rnf25 GENE PAGES
  • Alliance (1)
  • Gene:100003846 (1)
  • VEGA:OTTDARG00000021818 (1)
  • ORTHOLOGY for rnf25 (Chr: 3)
    CITATIONS (18)