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ZIRC
ZFIN ID: ZDB-GENE-040426-1581
Gene Name: ring finger protein 25
Gene Symbol: rnf25    Nomenclature History

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Previous Name: zgc:66260 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have ubiquitin protein ligase activity. Involved in positive regulation of canonical Wnt signaling pathway. Predicted to localize to the nucleus. Orthologous to human RNF25 (ring finger protein 25).
Genome Resources: Alliance (1),  Gene:100003846 (1),  Ensembl(GRCz11):ENSDARG00000027182 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66260]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17475 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31339 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf761 Unknown Unknown Unknown CRISPR
    DISEASE ASSOCIATED WITH rnf25 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rnf25 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of canonical Wnt signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rnf25-201 (1)    Ensembl 1708
    ncRNA rnf25-002 (1)    Ensembl 844
    rnf25-003 (1) 203
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rnf25 No data available
    MARKER RELATIONSHIPS
    rnf25 Contained in: [BAC] DKEY-16L2 (1) (order this)
    rnf25 Encodes: [cDNA] MGC:66260 (1) (order this), MGC:174511 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201183 (1) 1778 bp
    Genomic GenBank:BX571714 (1) 240105 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QPW9 (1) 513 aa
    Sequence Clusters UniGene:83619 (1)
    Sequence Information (all 16)
    ORTHOLOGY for rnf25 ( Chr: 3 )
    CITATIONS (19)