ZFIN ID: ZDB-GENE-040426-1551
Gene Name: STAM binding protein a
Gene Symbol: stambpa    Nomenclature History

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Previous Names: stambp, zgc:66147

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have Lys63-specific deubiquitinase activity and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in protein K63-linked deubiquitination. Predicted to localize to the cleavage furrow and endosome. Orthologous to human STAMBP (STAM binding protein).
Genome Resources: Alliance (1),  Gene:797422 (1),  Ensembl(GRCz11):ENSDARG00000054501 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66147]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa401 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1612 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31802 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-stambpa N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH stambpa HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Microcephaly-capillary malformation syndrome 614261
    DISEASE ASSOCIATED WITH stambpa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component cleavage furrow (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
    Domain IPR015063 USP8 dimerisation domain
    Domain IPR037518 MPN domain
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript stambpa-201 (1)    Ensembl 1917
    mRNA stambpa-202 (1)    Ensembl 2466
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM stambpa No data available
    MARKER RELATIONSHIPS
    stambpa Contained in: [BAC] CH211-265M20 (1), DKEY-88O9 (1) (order this)
    stambpa Encodes: [cDNA] MGC:66147 (1), MGC:198211 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200498 (1) 2455 bp
    Genomic GenBank:BX005309 (1) 179240 bp
    Select Tool
    Polypeptide UniProtKB:F1QBG8 (1) 418 aa
    Sequence Information (all 24)
    ORTHOLOGY for stambpa ( Chr: 10 )
    CITATIONS (23)