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ZIRC
ZFIN ID: ZDB-GENE-040426-1517
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Gene Name: solute carrier family 22 member 4
Gene Symbol: slc22a4
Sequence Ontology ID : SO:0001217

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Previous Names: octn1 (1), zgc:66036

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have quaternary ammonium group transmembrane transporter activity. Involved in several processes, including detoxification of mercury ion; response to methylmercury; and selenium  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19273 Point Mutation Unknown Premature Stop ENU
sa24040 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc22a4 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    rheumatoid arthritis {Rheumatoid arthritis, susceptibility to} 180300
    DISEASE ASSOCIATED WITH slc22a4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process detoxification of mercury ion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function transmembrane transporter activity (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005828 (1)
  • InterPro:IPR005829 (1)
  • InterPro:IPR020846 (1)
  • InterPro:IPR036259 (1)
  • PROSITE:PS00216 (1)
  • PROSITE:PS50850 (1)
  • Pfam:PF00083 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA slc22a4-002 (1) 897
    Select Tool
    slc22a4-003 (1) 824
    Select Tool
    mRNA slc22a4-201 (1) 1766
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc22a4 No data available
    MARKER RELATIONSHIPS
    slc22a4 Contained in: [Fosmid] CH1073-409B12 (1) (order this)
    slc22a4 Encodes: [cDNA] MGC:66036 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200849 (1) 1750 bp
    Select Tool
    Genomic GenBank:CU469525 (1) 36295 bp
    Select Tool
    Polypeptide UniProtKB:F1QKX0 (1) 553 aa
    Select Tool
    Sequence Clusters UniGene:83143 (1)
    Sequence Information (all 14)
    OTHER slc22a4 GENE PAGES
  • Alliance (1)
  • Gene:393822 (1)
  • VEGA:OTTDARG00000031506 (1)
  • Ensembl(GRCz11):ENSDARG00000005335 (2)
    • ORTHOLOGY for slc22a4 ( Chr: 21 )
    CITATIONS (21)