ZFIN ID: ZDB-GENE-040426-1479
Gene Name: calcium regulated heat stable protein 1
Gene Symbol: carhsp1    Nomenclature History

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Previous Names: wu:fc04b03, zgc:65920 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have mRNA 3'-UTR binding activity. Predicted to be involved in regulation of mRNA stability. Predicted to localize to cytoplasm. Orthologous to human CARHSP1 (calcium regulated heat stable protein 1).
Genome Resources: Alliance (1),  Gene:393534 (1),  Ensembl(GRCz11):ENSDARG00000053129 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138233]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20021 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH carhsp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH carhsp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of mRNA stability (more)
    Cellular Component cytoplasm (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA carhsp1-202 (1)    Ensembl 1556
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM carhsp1 No data available
    MARKER RELATIONSHIPS
    carhsp1 Contained in: [BAC] CH73-86A17 (1), CH211-287C12 (1)
    carhsp1 Encodes: [EST] fc04b03, IMAGE:7138233 (1)
    [cDNA] MGC:65920 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200562 (1) 1274 nt
    Genomic GenBank:CU464204 (1) 93246 nt
    Select Tool
    Polypeptide UniProtKB:Q6PHF1 (1) 155 aa
    Sequence Information (all 18)
    ORTHOLOGY for carhsp1 ( Chr: 3 )
    CITATIONS (19)