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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1433
Gene Name: TSC22 domain family, member 3
Gene Symbol: tsc22d3
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: gilz (1), zgc:65831, zgc:77028

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription factor activity; involved in brain development, dorsal/ventral pattern formation, and positive regulation of BMP signaling pathway; orthologous to  ...
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH tsc22d3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tsc22d3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process dorsal/ventral pattern formation (more)
Cellular Component cytoplasm (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000580 (1)
  • PROSITE:PS01289 (1)
  • Pfam:PF01166 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tsc22d3-201 (1) 1684
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tsc22d3 No data available
    MARKER RELATIONSHIPS
    tsc22d3Contained in: [BAC] CH211-220E11 (1) (order this)
    tsc22d3Encodes: [EST] fd58e04
    [cDNA] MGC:65831 (1) (order this), MGC:77028 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:BC068985 (1) 1795bp
    Genomic GenBank:AL954136 (1) 194869bp
    Select Tool
    Polypeptide UniProtKB:Q6NTI0 (1) 143aa
    Sequence Information (all 5)
    ORTHOLOGY for tsc22d3 (Chr: 14)
    CITATIONS (25)