ZFIN ID: ZDB-GENE-040426-1377
Gene Name: sorting nexin 15
Gene Symbol: snx15    Nomenclature History

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Previous Name: zgc:64136 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Is expressed in several structures, including alar plate midbrain region; immature eye; myotome; nervous system; and pharyngeal arch 3-7 skeleton. Orthologous to human SNX15 (sorting nexin 15).
Genome Resources: Alliance (1),  Gene:393352 (1),  Ensembl(GRCz11):ENSDARG00000020397 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44655 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snx15 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snx15 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component early endosome (more)
    Molecular Function phosphatidylinositol binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snx15-201 (1)    Ensembl 2566
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snx15 No data available
    MARKER RELATIONSHIPS
    snx15 Contained in: [BAC] CH211-285J22 (1), DKEY-170H8 (1) (order this)
    snx15 Encodes: [cDNA] MGC:64136 (1), MGC:174530 (1), MGC:198066 (1), MGC:198420 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001111237 (1) 1800 nt
    Genomic GenBank:BX322601 (1) 210153 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A9JT54 (1) 398 aa
    Sequence Information (all 24)
    ORTHOLOGY for snx15 ( Chr: 7 )
    CITATIONS (18)