ZFIN ID: ZDB-GENE-040426-1350
Gene Name: SFT2 domain containing 1
Gene Symbol: sft2d1    Nomenclature History

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Previous Names: c6orf83, zgc:64053 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to be involved in protein transport and vesicle-mediated transport. Predicted to localize to integral component of membrane. Orthologous to human SFT2D1 (SFT2 domain containing 1).
Genome Resources: Alliance (1),  Gene:393343 (1),  Ensembl(GRCz11):ENSDARG00000007362 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64053]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10976 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sft2d1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sft2d1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sft2d1-201 (1)    Ensembl 2548
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sft2d1 No data available
    MARKER RELATIONSHIPS
    sft2d1 Contained in: [BAC] CH211-130H14 (1), DKEYP-121D4 (1)
    sft2d1 Encodes: [cDNA] MGC:64053 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200372 (1) 2569 nt
    Genomic GenBank:CU571336 (1) 156589 nt
    Select Tool
    Polypeptide UniProtKB:F1QQJ6 (1) 161 aa
    Sequence Information (all 13)
    ORTHOLOGY for sft2d1 ( Chr: 13 )
    CITATIONS (20)