header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1349
Gene Name: zgc:64051
Gene Symbol: zgc:64051
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of plasma membrane. Is expressed in several structures, including anterior axial hypoblast; blood; mesoderm; tail bud; and vasculature. Orthologous to  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2004 [MGC:64051]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:64051 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:64051 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component integral component of membrane (more)
Molecular Function molecular_function (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000301 (1)
  • InterPro:IPR008952 (1)
  • InterPro:IPR018499 (1)
  • Pfam:PF00335 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA zgc:64051-003 (1) 951
    mRNA zgc:64051-201 (1) 1429
    zgc:64051-203 (1) 1268
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:64051 No data available
    MARKER RELATIONSHIPS
    zgc:64051 Contained in: [BAC] CH211-102C2 (1) (order this)
    zgc:64051 Encodes: [cDNA] MGC:64051 (1) (order this), MGC:192223 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200371 (1) 1471 bp
    Genomic GenBank:CU041374 (1) 141040 bp
    Select Tool
    Polypeptide UniProtKB:Q7T376 (1) 221 aa
    Sequence Clusters UniGene:86328 (1)
    Sequence Information (all 15)
    ORTHOLOGY for zgc:64051 ( Chr: 5 )
    CITATIONS (18)