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ZIRC
ZFIN ID: ZDB-GENE-040426-1328
Gene Name: solute carrier family 10 member 2
Gene Symbol: slc10a2
Sequence Ontology ID : SO:0000704

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Previous Names: ASBT (1), zgc:63998

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have bile acid:sodium symporter activity; involved in organic hydroxy compound transport; predicted to localize to the apical plasma membrane; orthologous to human SLC10A2 (solute  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 2 figures (2 images) from Thisse et al., 2004 [MGC:63998]
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2486 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc10a2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Bile acid malabsorption, primary 613291
    DISEASE ASSOCIATED WITH slc10a2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process organic hydroxy compound transport (more)
    Cellular Component apical plasma membrane (more)
    Molecular Function bile acid:sodium symporter activity (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc10a2-201 (1) 1828
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc10a2 No data available
    MARKER RELATIONSHIPS
    slc10a2Contained in: [BAC] RP71-84D19 (1) (order this)
    slc10a2Encodes: [cDNA] MGC:63998 (1) (order this), MGC:192418 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200358 (1) 1916bp
    Genomic GenBank:BX928746 (1) 93292bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RW10 (1) 361aa
    Sequence Clusters UniGene:88326 (1)
    Sequence Information (all 14)
    ORTHOLOGY for slc10a2 (Chr: 9)
    CITATIONS (21)