ZFIN ID: ZDB-GENE-040426-1291
Gene Name: ubiquitin-conjugating enzyme E2Nb
Gene Symbol: ube2nb    Nomenclature History

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Previous Names: ubc13b (1), ube2nl, zgc:63901 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have ubiquitin binding activity and ubiquitin conjugating enzyme activity. Involved in DNA damage response, detection of DNA damage. Predicted to localize to UBC13-MMS2 complex and nucleus. Orthologous to several human genes including UBE2N (ubiquitin conjugating enzyme E2 N).
Genome Resources: Alliance (1),  Gene:393313 (1),  Ensembl(GRCz11):ENSDARG00000045877 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63901]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ube2nb HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ube2nb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA damage response, detection of DNA damage (more)
Cellular Component nucleus (more)
Molecular Function ubiquitin binding (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ube2nb-201 (1)    Ensembl 1288
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ube2nb No data available
MARKER RELATIONSHIPS
ube2nb Contained in: [BAC] CH73-223F1 (1)
ube2nb Encodes: [cDNA] MGC:63901 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200342 (1) 1309 nt
Genomic GenBank:CU571163 (1) 90422 nt
Select Tool
Polypeptide UniProtKB:Q7T3F3 (1) 154 aa
Sequence Information (all 9)
ORTHOLOGY for ube2nb ( Chr: 4 )
CITATIONS (23)