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ZIRC
ZFIN ID: ZDB-GENE-040426-1274
Gene Name: SRY-box transcription factor 4b
Gene Symbol: sox4b
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:63851

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in closure of optic fissure; endocrine pancreas development; and negative regulation of smoothened  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39071 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH sox4b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Coffin-Siris syndrome 10 618506
    DISEASE ASSOCIATED WITH sox4b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process closure of optic fissure (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sox4b No data available
    MARKER RELATIONSHIPS
    sox4b Encodes: [cDNA] MGC:63851 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200901 (1) 3015 bp
    Genomic GenBank:CABZ01114992 (1) 4245 bp
    Polypeptide UniProtKB:A0A0R4IQD2 (1) 342 aa
    Sequence Clusters UniGene:151812 (1)
    Sequence Information (all 15)
    OTHER sox4b GENE PAGES
  • Alliance (1)
  • Gene:393875 (1)
  • Ensembl(GRCz11):ENSDARG00000098834 (1)
  • ORTHOLOGY for sox4b ( Chr: 16 )
    CITATIONS (32)