ZFIN ID: ZDB-GENE-040426-1268
Gene Name: musashi RNA-binding protein 2b
Gene Symbol: msi2b    Nomenclature History

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Attributions

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Previous Names: zgc:174035 (1), zgc:63812 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Involved in olfactory bulb development. Predicted to localize to cytoplasm; nucleus; and polysome. Is expressed in nervous system and otic vesicle. Orthologous to human MSI2 (musashi RNA binding protein 2).
Genome Resources: Alliance (1),  Gene:394084 (1),  Ensembl(GRCz11):ENSDARG00000032614 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ct57aGt Transgenic Insertion Unknown Unknown DNA
la012722Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019312Tg Transgenic Insertion Unknown Unknown DNA
    la019313Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019315Tg Transgenic Insertion Unknown Unknown DNA
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-msi2b N/A 1
    MO2-msi2b N/A 1
    TALEN1-msi2b
    1
    DISEASE ASSOCIATED WITH msi2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH msi2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process olfactory bulb development (more)
    Cellular Component cytoplasm (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA msi2b-201 (1)    Ensembl 914
    msi2b-202 (1)    Ensembl 2981
    msi2b-203 (1)    Ensembl 1107
    msi2b-205 (1)    Ensembl 434
    msi2b-206 (1)    Ensembl 728
    msi2b-207 (1)    Ensembl 608
    msi2b-208 (1)    Ensembl 749
    msi2b-209 (1)    Ensembl 520
    msi2b-211 (1)    Ensembl 731
    msi2b-212 (1)    Ensembl 1297
    msi2b-213 (1)    Ensembl 768
    msi2b-214 (1)    Ensembl 617
    msi2b-215 (1)    Ensembl 506
    ncRNA msi2b-002 (1)    Ensembl 804
    msi2b-013 (1)    Ensembl 751
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM msi2b No data available
    MARKER RELATIONSHIPS
    msi2b Contained in: [BAC] CH211-197C11 (1), CH211-209M20 (1), DKEY-181C10 (1) (order this), RP71-9L22 (1)
    msi2b Encodes: [cDNA] MGC:63812 (1), MGC:174035 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_201109 (1) 1852 nt
    Genomic GenBank:BX000438 (1) 195087 nt
    Select Tool
    Polypeptide UniProtKB:Q7SXT6 (1) 408 aa
    Sequence Information (all 56)
    ORTHOLOGY for msi2b ( Chr: 15 )
    CITATIONS (29)