ZFIN ID: ZDB-GENE-040426-1264
Gene Name: WD repeat domain 46
Gene Symbol: wdr46
Sequence Ontology ID : SO:0000704

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Previous Names: BING4 protein (1), Bing4-like (1), bing4 (1), c6orf11l (1), zgc:63793

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:63793]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
  alar plate midbrain region, central nervous system, eye, gut (all 13) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1451Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa27295 Point Mutation Unknown Splice Site ENU
    sa38222 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38223 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in: brain, central nervous system, eye, fourth ventricle (all 12) expand
    DISEASE ASSOCIATED WITH wdr46 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (more)
    Cellular Component 90S preribosome (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680
  • InterPro:IPR012952
  • InterPro:IPR015943
  • InterPro:IPR017986
  • PROSITE:PS50082
  • PROSITE:PS50294
  • Pfam:PF08149
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000035155 (1) 2478
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM wdr46 No data available
    MARKER RELATIONSHIPS
    wdr46Contained in: [BAC] DKEYP-87A12 (1)
    [Fosmid] CH1073-429L10 (1) (order this)
    wdr46Encodes: [EST] tdsubc_2d4
    [cDNA] MGC:63793 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200623 (1) 1888bp
    Genomic GenBank:CR385042 189958bp
    Select Tool
    Polypeptide UniProtKB:F1QRH4 583aa
    Sequence Clusters UniGene:4658 (1)
    Sequence Information (all 17)
    OTHER wdr46 GENE PAGES
  • Gene:393596 (1)
  • VEGA:OTTDARG00000026467 (1)
  • Ensembl(GRCz10):ENSDARG00000095879 (1)
  • ORTHOLOGY for wdr46 (Chr: 8)
    CITATIONS (18)