ZFIN ID: ZDB-GENE-040426-1245
Gene Name: phosphoglucomutase 1
Gene Symbol: pgm1    Nomenclature History

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Previous Name: zgc:63718

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have phosphoglucomutase activity. Predicted to be involved in carbohydrate metabolic process. Predicted to localize to cytosol. Is expressed in central nervous system; digestive system; myotome; notochord; and yolk syncytial layer. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation It; endometrial cancer; and teratoma. Orthologous to human PGM1 (phosphoglucomutase 1).
Genome Resources: Alliance (1),  Gene:394000 (1),  Ensembl(GRCz11):ENSDARG00000013561 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (11 images) from Thisse et al., 2004 [MGC:63718]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pgm1 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital disorder of glycosylation It Alliance Congenital disorder of glycosylation, type It 614921
DISEASE ASSOCIATED WITH pgm1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process carbohydrate metabolic process (more)
Cellular Component cytosol (more)
Molecular Function intramolecular transferase activity, phosphotransferases (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pgm1-201 (1)    Ensembl 2008
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pgm1 No data available
MARKER RELATIONSHIPS
pgm1 Contained in: [BAC] DKEY-148H10 (1) (order this)
pgm1 Encodes: [cDNA] MGC:63718 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_201025 (1) 2003 nt
Genomic GenBank:BX664614 (1) 184225 nt
Select Tool
Polypeptide UniProtKB:F1QF00 (1) 561 aa
Sequence Information (all 9)
ORTHOLOGY for pgm1 ( Chr: 6 )
CITATIONS (27)