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ZIRC
ZFIN ID: ZDB-GENE-040426-1213
Gene Name: solute carrier family 35 member D1b
Gene Symbol: slc35d1b    Nomenclature History

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Previous Name: zgc:63651 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to localize to the Golgi apparatus. Human ortholog(s) of this gene implicated in schneckenbecken dysplasia. Orthologous to human SLC35D1 (solute carrier family 35 member D1).
Genome Resources: Alliance (1),  Gene:393447 (1),  Ensembl(GRCz11):ENSDARG00000027986 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63651]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa25098 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slc35d1b HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
schneckenbecken dysplasia Alliance Schneckenbecken dysplasia 269250
DISEASE ASSOCIATED WITH slc35d1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component integral component of membrane (more)
Molecular Function antiporter activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004853 (1)
  • Pfam:PF03151 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc35d1b-201 (1)    Ensembl 1574
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc35d1b No data available
    MARKER RELATIONSHIPS
    slc35d1b Contained in: [BAC] CH211-273K1 (1) (order this)
    slc35d1b Encodes: [cDNA] MGC:63651 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200475 (1) 1641 bp
    Genomic GenBank:BX001029 (1) 141447 bp
    Select Tool
    Polypeptide UniProtKB:Q7SXZ5 (1) 363 aa
    Sequence Clusters UniGene:86287 (1)
    Sequence Information (all 12)
    ORTHOLOGY for slc35d1b ( Chr: 2 )
    CITATIONS (16)