Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1206
Gene Name: phosphorylase, glycogen, muscle b
Gene Symbol: pygmb
Previous Name: zgc:63642
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  brain, eye, gill, heart (all 8) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
McArdle disease 232600
GENE ONTOLOGY
Ontology GO Term
Biological Process carbohydrate metabolic process (more)
Cellular Component cellular_component (more)
Molecular Function glycogen phosphorylase activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000811 (1)
  • InterPro:IPR011833 (1)
  • PROSITE:PS00102 (1)
  • Pfam:PF00343 (1)
  • EC:2.4.1.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pygmb-001 (1) 2861
    ncRNA pygmb-002 (1) 1712
    mRNA pygmb-003 (1) 871
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pygmb No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    pygmb Contained in: [BAC] CH211-15B10 (order this)
    pygmb Encodes: [cDNA] MGC:63642 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200472 (1) 1740 bp
    Genomic GenBank:AL928799 (1) 89993 bp
    Select Tool
    Polypeptide UniProtKB:E7EXT3 (1) 842 aa
    Sequence Clusters UniGene:76123 (1)
    Sequence Information (all 14)
    OTHER pygmb GENE PAGES
  • Gene:393444 (1)
  • VEGA:OTTDARG00000027504 (1)
  • Ensembl(Zv9):ENSDARG00000013317 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish pygmb 7  
    Human PYGM 11 (11q12-q13.2)
  • OMIM:608455
  • Gene:5837
  • Mouse Pygm 19 ( 4.53 cM)
  • MGI:97830
  • Gene:19309
  • Orthology Details
    CITATIONS (15)