ZFIN ID: ZDB-GENE-040426-1135
Gene Name: ephrin-A1a
Gene Symbol: efna1a
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:63493 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ephrin receptor binding activity; predicted to be involved in axon guidance and ephrin receptor signaling pathway; predicted to localize to the plasma membrane; orthologous to human  ...
GENE EXPRESSION
All Expression Data: Fig. 3 from Brown et al., 2008
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Blastula:30%-epiboly (4.66h-5.25h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020953Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH efna1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH efna1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ephrin receptor signaling pathway (more)
Cellular Component integral component of membrane (more)
Molecular Function ephrin receptor binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001799 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR019765 (1)
  • InterPro:IPR031328 (1)
  • InterPro:IPR034252 (1)
  • PROSITE:PS01299 (1)
  • PROSITE:PS51551 (1)
  • Pfam:PF00812 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA efna1a-001 (1) 2545
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM efna1a No data available
    MARKER RELATIONSHIPS
    efna1aContained in: [BAC] DKEY-152C18 (1) (order this)
    efna1aEncodes: [cDNA] MGC:63493 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200597 (1) 2872bp
    Genomic GenBank:BX469895 (1) 179493bp
    Select Tool
    Polypeptide UniProtKB:Q6PGZ9 (1) 222aa
    Sequence Clusters UniGene:86783 (1)
    Sequence Information (all 9)
    OTHER efna1a GENE PAGES
  • Alliance (1)
  • Gene:393569 (1)
  • VEGA:OTTDARG00000014087 (1)
  • Ensembl(GRCz11):ENSDARG00000030326 (2)
  • ORTHOLOGY for efna1a (Chr: 19)
    CITATIONS (26)