ZFIN ID: ZDB-GENE-040426-1060
Gene Name: zgc:56525
Gene Symbol: zgc:56525    Nomenclature History

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Previous Name: zgc:77193

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Involved in response to steroid hormone. Predicted to localize to integral component of membrane. Is expressed in ovary. Orthologous to human GOLM1 (golgi membrane protein 1).
Genome Resources: Alliance (1),  Gene:393249 (1),  Ensembl(GRCz11):ENSDARG00000025858 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56525]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34494 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:56525 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:56525 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to steroid hormone (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:56525-201 (1)    Ensembl 1843
    ncRNA zgc:56525-002 (1) 471
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:56525 No data available
    MARKER RELATIONSHIPS
    zgc:56525 Contained in: [Fosmid] ZFOS-202G5 (1)
    zgc:56525 Encodes: [cDNA] MGC:56525 (1), MGC:77193 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200279 (1)
    Genomic GenBank:CU915766 (1) 36731 nt
    Select Tool
    Polypeptide UniProtKB:F1QI79 (1) 411 aa
    Sequence Information (all 15)
    ORTHOLOGY for zgc:56525 ( Chr: 8 )
    CITATIONS (20)