ZFIN ID: ZDB-GENE-040426-1055
Gene Name: synaptobrevin-like 1
Gene Symbol: sybl1    Nomenclature History

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Previous Name: zgc:56506 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have SNAP receptor activity and SNARE binding activity. Predicted to be involved in endosome to lysosome transport; exocytosis; and vesicle fusion. Predicted to localize to SNARE complex. Orthologous to human VAMP7 (vesicle associated membrane protein 7).
Genome Resources: Alliance (1),  Gene:393236 (1),  Ensembl(GRCz11):ENSDARG00000030775 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56506]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027583Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sybl1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sybl1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process vesicle-mediated transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function SNAP receptor activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sybl1-202 (1)    Ensembl 854
    sybl1-203 (1)    Ensembl 4515
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sybl1 No data available
    MARKER RELATIONSHIPS
    sybl1 Contained in: [BAC] CH211-274F20 (1)
    sybl1 Encodes: [cDNA] MGC:56506 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200266 (1) 876 nt
    Genomic GenBank:CU468164 (1) 159753 nt
    Select Tool
    Polypeptide UniProtKB:E9QC42 (1) 220 aa
    Sequence Information (all 12)
    ORTHOLOGY for sybl1 ( Chr: 14 )
    CITATIONS (20)