ZFIN Gene: pafah1b3

ZFIN ID: ZDB-GENE-040426-1026

ZFIN ID: ZDB-GENE-040426-1026

Gene Name:

platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit

Gene Symbol:

pafah1b3 Nomenclature History

Previous Name:

zgc:56430

Gene Type:

protein_coding_gene

Location:

Chr: 16 Mapping Details/Browsers

Description:

Predicted to have platelet-activating factor acetyltransferase activity. Predicted to be involved in brain development. Predicted to localize to cytoplasm. Orthologous to human PAFAH1B3 (platelet activating factor acetylhydrolase 1b catalytic subunit 3).

Genome Resources:

Alliance (1), Gene:394033 (1),

GENE EXPRESSION
Directly Submitted Expression Data:	1 figure (1 image) from Thisse et al., 2004 [MGC:56430]
Wild-type Stages, Structures:	Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
	unspecified
High Throughput Expression:	GEO (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa9090	Point Mutation	Unknown	Unknown	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa42671	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH pafah1b3 HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH pafah1b3 VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Molecular Function	hydrolase activity (more)

GO Terms (all 1)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (nt)	Analysis
aberrant processed transcript	pafah1b3-206 (1)	784	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pafah1b3-203 (1)	326	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	pafah1b3-204 (1)	2449	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	pafah1b3-003 (1)	1172	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Browsers: NCBI

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM pafah1b3 No data available

MARKER RELATIONSHIPS

pafah1b3 Contained in:	[BAC] DKEY-250K15 (1) (order this)
pafah1b3 Encodes:	[cDNA] MGC:56430 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_201058 (1)	2420 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX571826 (1)	167796 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A2R8QMI4 (1)	268 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Sequence Information (all 12)

ORTHOLOGY for pafah1b3 ( Chr: 16 )

CITATIONS (16)

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