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ZIRC
ZFIN ID: ZDB-GENE-040426-1015
Gene Name: unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Gene Symbol: use1
Sequence Ontology ID : SO:0001217

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Previous Names: fj43b06, wu:fj43b06, zgc:56402 (1)

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in protein transport and vesicle-mediated transport. Predicted to localize to the endoplasmic reticulum; endoplasmic reticulum membrane; and integral component of membrane.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56402]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15607 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43782 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH use1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH use1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function molecular_function (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019150 (1)
  • Pfam:PF09753 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA use1-201 (1) 1785
    use1-202 (1) 470
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM use1 No data available
    MARKER RELATIONSHIPS
    use1 Contained in: [BAC] DKEY-6N3 (1) (order this)
    use1 Encodes: [EST] fj43b06
    [cDNA] MGC:56402 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200324 (1) 1819 bp
    Genomic GenBank:BX666064 (1) 156234 bp
    Select Tool
    Polypeptide UniProtKB:Q1LVG2 (1) 261 aa
    Sequence Clusters UniGene:80525 (1)
    Sequence Information (all 15)
    ORTHOLOGY for use1 ( Chr: 22 )
    CITATIONS (25)