ZFIN ID: ZDB-GENE-040426-1013
Gene Name: TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene Symbol: taf8    Nomenclature History

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Previous Names: TAF8 (1), tbnl (1), zgc:56401, zgc:77837

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have protein heterodimerization activity. Predicted to be involved in cell differentiation and multicellular organism development. Predicted to localize to transcription factor TFIID complex. Orthologous to human TAF8 (TATA-box binding protein associated factor 8).
Genome Resources: Alliance (1),  Gene:393256 (1),  Ensembl(GRCz11):ENSDARG00000026806 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56401]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi3079Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi4055Tg Transgenic Insertion Intron 1 Unknown DNA
    la022668Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH taf8 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH taf8 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell differentiation (more)
    Cellular Component transcription factor TFIID complex (more)
    Molecular Function protein heterodimerization activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA taf8-201 (1)    Ensembl 1510
    ncRNA taf8-002 (1)    Ensembl 762
    pseudogenic transcript ottdart00000042659 (1) 1347
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM taf8
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(taf8:EGFP) taf8 EGFP Danio rerio 1 3
    MARKER RELATIONSHIPS
    taf8 Contained in: [BAC] CH211-66I15 (1)
    taf8 Encodes: [cDNA] MGC:56401 (1), MGC:77837 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200286 (1) 1334 nt
    Genomic GenBank:BX957355 (1) 155581 nt
    Select Tool
    Polypeptide UniProtKB:Q6P0T2 (1) 308 aa
    Sequence Information (all 14)
    ORTHOLOGY for taf8 ( Chr: 23 )
    CITATIONS (36)