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ZIRC
ZFIN ID: ZDB-GENE-040303-2
Gene Name: protein O-fucosyltransferase 1
Gene Symbol: pofut1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110472

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Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have peptide-O-fucosyltransferase activity; predicted to be involved in fucose metabolic process; orthologous to human POFUT1 (protein O-fucosyltransferase 1).
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6906979]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH pofut1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Dowling-Degos disease Dowling-Degos disease 2 615327
DISEASE ASSOCIATED WITH pofut1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process carbohydrate metabolic process (more)
Molecular Function fucosyltransferase activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019378 (1)
  • InterPro:IPR039922 (1)
  • Pfam:PF10250 (1)
  • EC:2.4.1.221 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pofut1-201 (1) 1549
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pofut1 No data available
    MARKER RELATIONSHIPS
    pofut1Contained in: [BAC] CH211-254L12 (1) (order this)
    pofut1Encodes: [EST] IMAGE:6906979 (1) (order this), IMAGE:7144114 (1) (order this)
    [cDNA] MGC:110472 (1) (order this), MGC:192645 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205718 (1) 1822bp
    Genomic GenBank:CU914163 (1) 131057bp
    Select Tool
    Polypeptide UniProtKB:F1R676 (1) 395aa
    Sequence Clusters UniGene:84151 (1)
    Sequence Information (all 24)
    ORTHOLOGY for pofut1 (Chr: 23)
    CITATIONS (22)