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ZIRC
ZFIN ID: ZDB-GENE-040213-1
Gene Name: methyl-CpG binding domain protein 4
Gene Symbol: mbd4    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and pyrimidine-specific mismatch base pair DNA N-glycosylase activity. Predicted to be involved in DNA repair. Is expressed in retina and trunk.
Genome Resources: Alliance (1),  Gene:101887128 (1),  Ensembl(GRCz11):ENSDARG00000110298 (1)
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-mbd4 N/A 3
PHENOTYPE No data available
DISEASE ASSOCIATED WITH mbd4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH mbd4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA repair (more)
Cellular Component cellular_component (more)
Molecular Function catalytic activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011257 (1)
  • InterPro:IPR017352 (1)
  • TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mbd4 No data available
    MARKER RELATIONSHIPS No data available
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_017357565 (1)
    Genomic GenBank:FO904970 (1) 32556 bp
    Select Tool
    Polypeptide UniProtKB:A0A097ZPG7 (1) 191 aa
    Sequence Clusters UniGene:124380 (1)
    Sequence Information (all 29)
    ORTHOLOGY for mbd4 ( Chr: 8 )
    CITATIONS (16)