ZFIN ID: ZDB-GENE-040122-3
Gene Name: RAB5A, member RAS oncogene family, b
Gene Symbol: rab5ab
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: rab5al

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activity; involved in several processes, including Spemann organizer formation, endocytosis, and epiboly involved in gastrulation with mouth forming second; predicted to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138917]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 3 figures from Kenyon et al., 2015
Observed in:
DISEASE ASSOCIATED WITH rab5ab HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rab5ab VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process endocytosis (more)
Cellular Component early endosome (more)
Molecular Function GTPase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rab5ab-001 (1) 1279
    rab5ab-002 (1) 823
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM rab5ab
    MARKER RELATIONSHIPS
    rab5abContained in: [BAC] DKEY-82O10 (1) (order this)
    rab5abEncodes: [EST] IMAGE:7138917 (1) (order this)
    [cDNA] MGC:56644 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200970 (1) 1242bp
    Genomic GenBank:CR848668 (1) 165083bp
    Select Tool
    Polypeptide UniProtKB:Q7ZUG4 (1) 216aa
    Sequence Clusters UniGene:77063 (1)
    Sequence Information (all 11)
    OTHER rab5ab GENE PAGES
  • Alliance (1)
  • Gene:393945 (1)
  • VEGA:OTTDARG00000027787 (1)
  • Ensembl(GRCz11):ENSDARG00000007257 (2)
  • ORTHOLOGY for rab5ab (Chr: 16)
    CITATIONS (28)