ZFIN ID: ZDB-GENE-040121-7
Gene Name: archain 1b
Gene Symbol: arcn1b
Sequence Ontology ID : SO:0000704

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Previous Names: arcn1l, wu:fa10d11, wu:fb01b08, wu:fb76d02, wu:fc52b08

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2001 [cb334]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
  axis, cleithrum, lateral line system, notochord (all 8) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35850 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arcn1b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component COPI vesicle coat (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011012 (1)
  • InterPro:IPR022775 (1)
  • InterPro:IPR027059 (1)
  • InterPro:IPR028565 (1)
  • PROSITE:PS51072 (1)
  • Pfam:PF00928 (1)
  • Pfam:PF01217 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arcn1b-001 (1) 2757
    arcn1b-002 (1) 790
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arcn1b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arcn1bContained in: [BAC] CH211-262M14 (1) (order this)
    arcn1bContains: [STS] chunp30165
    arcn1bEncodes: [EST] cb334 (order this), fb01b08
    [cDNA] MGC:56094 (1) (order this), MGC:86617 (1) (order this)
    arcn1bHas Artifact: [EST] fa10d11
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201993 (1) 2699bp
    Genomic GenBank:CR385077 (1) 105764bp
    Select Tool
    Polypeptide UniProtKB:Q7ZU89 (1) 512aa
    Sequence Clusters UniGene:75156 (1)
    Sequence Information (all 16)
    OTHER arcn1b GENE PAGES
  • Gene:399661 (1)
  • VEGA:OTTDARG00000020709 (1)
  • Ensembl(GRCz10):ENSDARG00000031214 (1)
  • ORTHOLOGY for arcn1b (Chr: 15)
    CITATIONS (17)