ZFIN ID: ZDB-GENE-040109-7
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Gene Name: histone deacetylase 9b
Gene Symbol: hdac9b
Previous Name: hdac9
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019605Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la019607Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la019608Tg Transgenic Insertion Unknown Unknown DNA
    Targeting reagents: MO1-hdac9b (1), MO2-hdac9b (1), MO3-hdac9b (1), MO4-hdac9b (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hdac9b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR024643 (1)
    		•
  • Pfam:PF12203 (1)
    		•
  • EC:3.5.1.98 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac9b-001 (1) 2272
    Select Tool
    ncRNA hdac9b-002 (1) 3778
    Select Tool
    mRNA hdac9b-003 (1) 825
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    ncRNA hdac9b-004 (1) 559
    Select Tool
    hdac9b-005 (1) 287
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    hdac9bContained in: [BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1) (order this)
    hdac9bEncodes: [cDNA] MGC:73392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200816 (1) 2181bp
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    Genomic GenBank:BX511151 (1) 157538bp
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    Polypeptide UniProtKB:F1QUC5 (1) 612aa
    Select Tool
    Sequence Clusters UniGene:25756 (1)
    Sequence Information (all 18)
    OTHER hdac9b GENE PAGES
  • Gene:393789 (1)
  • VEGA:OTTDARG00000033007 (1)
  • Ensembl(GRCz10):ENSDARG00000056642 (1)
    • ORTHOLOGY for hdac9b (Chr: 16)
    Species Symbol Chromosome Accession # Evidence
    Human HDAC9 7
  • Gene:9734
  • OMIM:606543
  • HGNC:14065
    		•  Amino acid sequence comparison (1)
    Conserved genome location (synteny) (2)
    Download Curated Orthology
    CITATIONS (25)