ZFIN Gene: hdac9b

ZFIN ID: ZDB-GENE-040109-7

ZFIN ID: ZDB-GENE-040109-7

GENE EXPRESSION
Curated Microarray Expression:	GEO (1)

MUTANTS AND TARGETED KNOCKDOWNS

Alleles:	la019605Tg, la019607Tg, la019608Tg
Knockdown reagents:	MO1-hdac9b (1), MO2-hdac9b (1)

PHENOTYPE No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	chromatin modification (more)
Cellular Component	nucleus (more)
Molecular Function	NAD-dependent histone deacetylase activity (H3-K14 specific) (more)

GO Terms (all 12)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR000286 (1) InterPro:IPR024643 (1)	Pfam:PF12203 (1)	EC:3.5.1.98 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	hdac9b-001 (1)	2272	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
ncRNA	hdac9b-002 (1)	3778	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
mRNA	hdac9b-003 (1)	825	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
ncRNA	hdac9b-004 (1)	559	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
	hdac9b-005 (1)	287	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega

GENE PRODUCT DESCRIPTION

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

hdac9b Contained in:	[BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1) (order this)
hdac9b Encodes:	[cDNA] MGC:73392 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_200816 (1)	2181 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	GenBank:BX511151 (1)	157538 bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:F1QUC6 (1)	643 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast Vega Protein Blast
Sequence Clusters	UniGene:25756 (1)

OTHER hdac9b GENE PAGES

Gene:393789 (1)

VEGA:OTTDARG00000033007 (1)

Ensembl(Zv9):ENSDARG00000056642 (1)

ORTHOLOGY

CITATIONS (24)