ZFIN ID: ZDB-GENE-040109-7
Gene Name: histone deacetylase 9b
Gene Symbol: hdac9b
Sequence Ontology ID : SO:0000704

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Previous Name: hdac9

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019605Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019607Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019608Tg Transgenic Insertion Unknown Unknown DNA
    sa22811 Point Mutation Unknown Nonsynonymous ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-hdac9b (1), MO2-hdac9b (1), MO3-hdac9b (1), MO4-hdac9b (1)
    PHENOTYPE
    Data: Fig. 3 from Huang et al., 2013
    Observed in: erythroid lineage cell, primitive hemopoiesis
    DISEASE ASSOCIATED WITH hdac9b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR024643 (1)
  • Pfam:PF12203 (1)
  • EC:3.5.1.98 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac9b-001 (1) 2272
    ncRNA hdac9b-002 (1) 3778
    mRNA hdac9b-003 (1) 825
    ncRNA hdac9b-004 (1) 559
    hdac9b-005 (1) 287
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available
    MARKER RELATIONSHIPS
    hdac9bContained in: [BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1) (order this)
    hdac9bEncodes: [cDNA] MGC:73392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200816 (1) 2181bp
    Genomic GenBank:BX511151 (1) 157538bp
    Select Tool
    Polypeptide UniProtKB:F1QUC5 (1) 612aa
    Sequence Clusters UniGene:25756 (1)
    Sequence Information (all 19)
    OTHER hdac9b GENE PAGES
  • Gene:393789 (1)
  • VEGA:OTTDARG00000033007 (1)
  • Ensembl(GRCz10):ENSDARG00000056642 (1)
  • ORTHOLOGY for hdac9b (Chr: 16)
    CITATIONS (26)