ZFIN ID: ZDB-GENE-040109-7
Gene Name: histone deacetylase 9b
Gene Symbol: hdac9b
Sequence Ontology ID : SO:0000704

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Previous Name: hdac9

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019605Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019607Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019608Tg Transgenic Insertion Unknown Unknown DNA
    sa22811 Point Mutation Unknown Nonsynonymous ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-hdac9b (1), MO2-hdac9b (1), MO3-hdac9b (1), MO4-hdac9b (1)
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in: dorsal longitudinal anastomotic vessel, erythroid lineage cell, intersegmental vessel, lymph vessel development (all 7) expand
    DISEASE ASSOCIATED WITH hdac9b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286
  • InterPro:IPR015943
  • InterPro:IPR024643
  • Pfam:PF12203
  • EC:3.5.1.98
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac9b-001 (1) 2272
    ncRNA hdac9b-002 (1) 3778
    mRNA hdac9b-003 (1) 825
    ncRNA hdac9b-004 (1) 559
    hdac9b-005 (1) 287
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available
    MARKER RELATIONSHIPS
    hdac9bContained in: [BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1) (order this)
    hdac9bEncodes: [cDNA] MGC:73392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200816 (1) 2181bp
    Genomic GenBank:BX511151 (1) 157538bp
    Select Tool
    Polypeptide UniProtKB:F1QUC5 612aa
    Sequence Clusters UniGene:25756 (1)
    Sequence Information (all 19)
    OTHER hdac9b GENE PAGES
  • Alliance (1)
  • Gene:393789 (1)
  • VEGA:OTTDARG00000033007 (1)
  • Ensembl(GRCz10):ENSDARG00000056642 (1)
  • ORTHOLOGY for hdac9b (Chr: 16)
    CITATIONS (26)