ZFIN ID: ZDB-GENE-040109-7
Gene Name: histone deacetylase 9b
Gene Symbol: hdac9b
Previous Name: hdac9
Location: Chr: 16   Details
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Knockdown reagents: MO1-hdac9b (1), MO2-hdac9b (1), MO3-hdac9b (1), MO4-hdac9b (1)

Allele Type Mutagen Suppliers
la019605Tg Transgenic Insertion DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019607Tg Transgenic Insertion DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019608Tg Transgenic Insertion DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hdac9b HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR024643 (1)
  • Pfam:PF12203 (1)
  • EC:3.5.1.98 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac9b-001 (1) 2272
    ncRNA hdac9b-002 (1) 3778
    mRNA hdac9b-003 (1) 825
    ncRNA hdac9b-004 (1) 559
    hdac9b-005 (1) 287
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    hdac9b Contained in: [BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1) (order this)
    hdac9b Encodes: [cDNA] MGC:73392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200816 (1) 2181 bp
    Genomic GenBank:BX511151 (1) 157538 bp
    Select Tool
    Polypeptide UniProtKB:F1QUC6 (1) 643 aa
    Sequence Clusters UniGene:25756 (1)
    Sequence Information (all 18)
    OTHER hdac9b GENE PAGES
  • Gene:393789 (1)
  • VEGA:OTTDARG00000033007 (1)
  • Ensembl(Zv9):ENSDARG00000056642 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish hdac9b 16  
    Human HDAC9 7 (7p21.1)
  • OMIM:606543
  • Gene:9734
  • Orthology Details
    CITATIONS (25)