ZFIN ID: ZDB-GENE-040109-4
Gene Name: SRY (sex determining region Y)-box 7
Gene Symbol: sox7
Sequence Ontology ID : SO:0000704

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Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 21 figures from 9 publications
Directly Submitted Expression Data: 6 figures (17 images) from Thisse et al., 2004 [MGC:92054]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu5626 Point Mutation Unknown Premature Stop ENU
Targeting reagents:
PHENOTYPE
Data: 6 figures from 3 publications
Observed in:
DISEASE ASSOCIATED WITH sox7 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sox7 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process artery development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009071 (1)
  • InterPro:IPR021934 (1)
  • InterPro:IPR033392 (1)
  • InterPro:IPR036910 (1)
  • PROSITE:PS50118 (1)
  • PROSITE:PS51516 (1)
  • Pfam:PF00505 (1)
  • Pfam:PF12067 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sox7-001 (1) 2567
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sox7 No data available
    MARKER RELATIONSHIPS
    sox7Contained in: [BAC] DKEY-155D18 (order this)
    sox7Encodes: [cDNA] MGC:92054 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080750 (1) 2246bp
    Genomic GenBank:BX510941 (1) 183212bp
    Select Tool
    Polypeptide UniProtKB:Q6TEN5 (1) 390aa
    Sequence Clusters UniGene:151971 (1)
    Sequence Information (all 13)
    OTHER sox7 GENE PAGES
  • Alliance (1)
  • Gene:394203 (1)
  • VEGA:OTTDARG00000004753 (1)
  • Ensembl(GRCz11):ENSDARG00000030125 (2)
  • ORTHOLOGY for sox7 (Chr: 20)
    CITATIONS (47)