Gene

nop56

ID
ZDB-GENE-040109-1
Name
NOP56 ribonucleoprotein homolog
Symbol
nop56 Nomenclature History
Previous Names
  • nol5a
  • NOP56 (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have snoRNA binding activity. Involved in heart development. Predicted to localize to box C/D snoRNP complex and small-subunit processome. Is expressed in midbrain. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 36. Orthologous to human NOP56 (NOP56 ribonucleoprotein).
Genome Resources
Note
None
Expression
All Expression Data
1 figure from Recher et al., 2013
Cross-Species Comparison
High Throughput Data
No data available
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nop56 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
spinocerebellar ataxia type 36 Alliance Spinocerebellar ataxia 36 614153
Associated With nop56 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002687 Nop domain
Domain IPR012974 NOP5, N-terminal
Domain IPR012976 NOSIC
Homologous_superfamily IPR029012 Helix hairpin bin domain superfamily
Homologous_superfamily IPR036070 Nop domain superfamily
Homologous_superfamily IPR042239 Nop, C-terminal domain
Domain Details Per Protein
Protein Length Helix hairpin bin domain superfamily NOP5, N-terminal Nop, C-terminal domain Nop domain Nop domain superfamily NOSIC
UniProtKB:Q6TEL4 494
UniProtKB:G1K2N3 110
UniProtKB:Q6PH34 481
UniProtKB:Q6DRE5 548
UniProtKB:Q5BKV5 301
UniProtKB:E7EZW9 142
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations