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ZIRC
ZFIN ID: ZDB-GENE-031118-30
Gene Name: RAB5C, member RAS oncogene family
Gene Symbol: rab5c
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: wu:fb98b08, wu:fi16g01

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activity. Involved in several processes, including angiogenesis; gastrulation with mouth forming second; and regulation of endocytosis. Localizes to the early endosome.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2004 [IMAGE:7143044]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023931Tg Transgenic Insertion Unknown Unknown DNA
sa44559 Point Mutation Unknown Unknown ENU
Targeting reagents:
DISEASE ASSOCIATED WITH rab5c HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rab5c VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process angiogenesis (more)
Cellular Component early endosome (more)
Molecular Function protein binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rab5c-201 (1) 2264
    rab5c-202 (1) 747
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    MARKER RELATIONSHIPS
    rab5cContained in: [BAC] CH211-210G13 (1) (order this)
    rab5cEncodes: [EST] fb98b08, fi16g01, IMAGE:7143044 (1) (order this)
    [cDNA] MGC:55826 (1) (order this), MGC:77261 (1) (order this), MGC:192222 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201501 (1) 2268bp
    Genomic GenBank:BX005093 (1) 155392bp
    Select Tool
    Polypeptide UniProtKB:Q7ZVP2 (1) 221aa
    Sequence Clusters UniGene:5030 (1)
    Sequence Information (all 24)
    ORTHOLOGY for rab5c (Chr: 3)
    CITATIONS (45)