ZFIN ID: ZDB-GENE-031118-179
Gene Name: HECT domain containing 3
Gene Symbol: hectd3    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fc38h02, zgc:153380

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have ubiquitin-protein transferase activity. Is expressed in hatching gland; notochord; and polster. Orthologous to human HECTD3 (HECT domain E3 ubiquitin protein ligase 3).
Genome Resources: Alliance (1),  Gene:563189 (1),  Ensembl(GRCz11):ENSDARG00000038905 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (4 images) from Thisse et al., 2004 [IMAGE:7158098]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Segmentation:14-19 somites (16.0h-19.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hectd3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hectd3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein ubiquitination (more)
Molecular Function transferase activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000569 HECT domain
Domain IPR004939 APC10/DOC domain
Homologous_superfamily IPR008979 Galactose-binding-like domain superfamily
Homologous_superfamily IPR035983 HECT, E3 ligase catalytic domain
Family IPR042469 E3 ubiquitin-protein ligase HECTD3
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA hectd3-204 (1)    Ensembl 2975
ncRNA hectd3-002 (1)    Ensembl 395
hectd3-003 (1)    Ensembl 855
hectd3-004 (1)    Ensembl 649
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM hectd3 No data available
MARKER RELATIONSHIPS
hectd3 Contained in: [BAC] CH211-106K21 (1)
hectd3 Encodes: [EST] fc38h02, IMAGE:7158098 (1)
[cDNA] MGC:153380 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001077159 (1) 2973 bp
Genomic GenBank:BX569796 (1) 109947 bp
Select Tool
Polypeptide UniProtKB:F1Q5V5 (1) 854 aa
Sequence Information (all 20)
ORTHOLOGY for hectd3 ( Chr: 2 )
CITATIONS (20)