ZFIN ID: ZDB-GENE-031118-14
Gene Name: alkylglycerone phosphate synthase
Gene Symbol: agps

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Previous Names: fd16e06, wu:fd16e06, zgc:56718

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56718]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13105 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa14227 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21415 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34542 Point Mutation Unknown Splice Site ENU
    sa34543 Point Mutation Unknown Splice Site ENU
    sa38719 Point Mutation Unknown Splice Site ENU
    sa41334 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH agps HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    rhizomelic chondrodysplasia punctata Rhizomelic chondrodysplasia punctata, type 3 600121
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process lipid biosynthetic process (more)
    Molecular Function alkylglycerone-phosphate synthase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004113 (1)
  • InterPro:IPR006094 (1)
  • InterPro:IPR016164 (1)
  • InterPro:IPR016166 (1)
  • InterPro:IPR016167 (1)
  • InterPro:IPR016169 (1)
  • InterPro:IPR025650 (1)
  • PROSITE:PS51387 (1)
  • Pfam:PF01565 (1)
  • Pfam:PF02913 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA agps-001 (1) 777
    agps-002 (1) 346
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM agps No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    agpsContained in: [BAC] CH73-33M9 (1) (order this)
    [Fosmid] CH1073-172F18 (1) (order this)
    agpsEncodes: [EST] fd16e06
    [cDNA] MGC:56718 (1) (order this), MGC:192039 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200113 (1) 2091bp
    Genomic GenBank:CU104712 (1) 25607bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IPN7 (1) 631aa
    Sequence Clusters UniGene:78669 (1)
    Sequence Information (all 24)
    OTHER agps GENE PAGES
  • Gene:386801 (1)
  • VEGA:OTTDARG00000038204 (1)
  • Ensembl(GRCz10):ENSDARG00000042821 (1)
  • ORTHOLOGY for agps (Chr: 9)
    Species Symbol Chromosome Accession # Evidence
    Human AGPS 2
  • Gene:8540
  • OMIM:603051
  • HGNC:327
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (14)