ZFIN ID: ZDB-GENE-031118-14
Gene Name: alkylglycerone phosphate synthase
Gene Symbol: agps    Nomenclature History

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Previous Names: fd16e06, wu:fd16e06, zgc:56718

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have FAD binding activity; alkylglycerone-phosphate synthase activity; and oxidoreductase activity. Predicted to be involved in ether lipid biosynthetic process and oxidation-reduction process. Predicted to localize to peroxisome. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata and rhizomelic chondrodysplasia punctata type 3. Orthologous to human AGPS (alkylglycerone phosphate synthase).
Genome Resources: Alliance (1),  Gene:386801 (1),  Ensembl(GRCz11):ENSDARG00000042821 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56718]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH agps HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
rhizomelic chondrodysplasia punctata type 3 Alliance Rhizomelic chondrodysplasia punctata, type 3 600121
DISEASE ASSOCIATED WITH agps VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ether lipid biosynthetic process (more)
Cellular Component peroxisome (more)
Molecular Function alkylglycerone-phosphate synthase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA agps-202 (1)    Ensembl 777
agps-203 (1)    Ensembl 346
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM agps No data available
MARKER RELATIONSHIPS
agps Contained in: [BAC] CH73-33M9 (1)
[Fosmid] CH1073-172F18 (1)
agps Encodes: [EST] fd16e06
[cDNA] MGC:56718 (1), MGC:192039 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200113 (1) 2091 nt
Genomic GenBank:FO905024 (1) 33012 nt
Select Tool
Polypeptide UniProtKB:F1QC72 (1) 629 aa
Sequence Information (all 24)
ORTHOLOGY for agps ( Chr: 9 )
CITATIONS (25)