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ZIRC
ZFIN ID: ZDB-GENE-031118-126
Gene Name: calcium binding and coiled-coil domain 1b
Gene Symbol: calcoco1b
Sequence Ontology ID : SO:0000704

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Previous Names: tceb3, elongin A (1), wu:fw66g10, zgc:56638

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have translation elongation factor activity. Predicted to be involved in translational elongation. Orthologous to human CALCOCO1 (calcium binding and coiled-coil domain 1).
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa45419 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH calcoco1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH calcoco1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component cellular_component (more)
    Molecular Function translation elongation factor activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012852 (1)
  • InterPro:IPR041611 (1)
  • Pfam:PF07888 (1)
  • Pfam:PF17751 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA calcoco1b-201 (1) 2957
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM calcoco1b No data available
    MARKER RELATIONSHIPS
    calcoco1bEncodes: [cDNA] MGC:56638 (1) (order this)
    calcoco1bHas Artifact: [EST] fw66g10 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200121 (1) 2979bp
    Genomic GenBank:CABZ01088247 (1) 22558bp
    Polypeptide UniProtKB:F1RBA9 (1) 560aa
    Sequence Clusters UniGene:108227 (1)
    Sequence Information (all 16)
    ORTHOLOGY for calcoco1b (Chr: 11)
    CITATIONS (16)