ZFIN ID: ZDB-GENE-031117-1
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Gene Name: recombination signal binding protein for immunoglobulin kappa J region a
Gene Symbol: rbpja
Sequence Ontology ID : SO:0000704

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Previous Names: rbpj (1), ik:tdsubc_1e8, rbpsuh (1), Su(H)1 (1), Su(H) (1), tdsubc_1e8, xx:tdsubc_1e8

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Pharyngula:Prim-15 (30.0h-36.0h)
  head, unspecified, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013570Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la013571Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents: CRISPR1-rbpja (1), MO1-rbpja (1), MO3-rbpja (1), MO4-rbpja,rbpjb (1), MO5-rbpja,rbpjb (1)
    PHENOTYPE
    Data: 3 figures from Echeverri et al., 2007
    Observed in: heart, heart tube, post-vent region, Rohon-Beard neuron (all 5) expand
    DISEASE ASSOCIATED WITH rbpja HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Adams-Oliver syndrome Adams-Oliver syndrome 3 614814
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process adrenal gland development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008967 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR015350 (1)
  • InterPro:IPR015351 (1)
    		•
  • Pfam:PF09270 (1)
  • Pfam:PF09271 (1)
    		•
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rbpja
    Tg(HSE:GFP,dnrbpja-MYC), tg(mitfa:teta-gbd,tetre:nls-venus-2a-dnrbpja)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    rbpjaEncodes: [EST] tdsubc_1e8
    [cDNA] MGC:195350 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198878 (1) 5139bp
    Select Tool
    Polypeptide UniProtKB:Q6YLA3 (1) 498aa
    Select Tool
    Sequence Clusters UniGene:19492 (1)
    Sequence Information (all 18)
    OTHER rbpja GENE PAGES
  • Gene:386772 (1)
  • Ensembl(GRCz10):ENSDARG00000003398 (1)
    • ORTHOLOGY for rbpja (Chr: 1)
    CITATIONS (54)