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ZIRC
ZFIN ID: ZDB-GENE-031104-2
Gene Name: synaptophysin a
Gene Symbol: sypa
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have syntaxin-1 binding activity. Predicted to localize to the presynaptic active zone and synaptic vesicle membrane. Human ortholog(s) of this gene implicated in non-syndromic X-linked  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa372 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21278 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sypa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    non-syndromic X-linked intellectual disability Mental retardation, X-linked 96 300802
    DISEASE ASSOCIATED WITH sypa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of neuronal synaptic plasticity (more)
    Cellular Component integral component of membrane (more)
    Molecular Function syntaxin-1 binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001285 (1)
  • InterPro:IPR008253 (1)
  • PROSITE:PS51225 (1)
  • Pfam:PF01284 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sypa-202 (1) 931
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sypa No data available
    MARKER RELATIONSHIPS
    sypaContained in: [BAC] CH211-157C18 (1) (order this), CH211-215H12 (1) (order this), DKEY-70P6 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001143977 (1)
    Genomic GenBank:AL831748 202357bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0S5B9 (1) 294aa
    Sequence Clusters UniGene:108619 (1)
    Sequence Information (all 15)
    ORTHOLOGY for sypa (Chr: 8)
    CITATIONS (18)