ZFIN ID: ZDB-GENE-031007-1
Gene Name: ribosomal protein L13
Gene Symbol: rpl13

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Previous Name: zgc:92272 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6910738]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1016Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa638 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE
    Data: 3 figures from 3 publications
    Observed in: central nervous system, extension, eye, fourth ventricle (all 13) expand
    DISEASE ASSOCIATED WITH rpl13 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of cell cycle (more)
    Cellular Component intracellular (more)
    Molecular Function structural constituent of ribosome (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001380 (1)
  • InterPro:IPR018256 (1)
  • PROSITE:PS01104 (1)
  • Pfam:PF01294 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpl13-001 (1) 1383
    rpl13-002 (1) 658
    ncRNA rpl13-003 (1) 581
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpl13 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    rpl13Contained in: [BAC] CH73-352P16 (1) (order this)
    [Fosmid] CH1073-68F2 (1) (order this)
    rpl13Encodes: [EST] IMAGE:6910738 (1) (order this)
    [cDNA] MGC:92272 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198143 (1) 663bp
    Genomic GenBank:CU683900 (1) 61935bp
    Select Tool
    Polypeptide UniProtKB:Q90Z10 (1) 211aa
    Sequence Clusters UniGene:75569 (1)
    Sequence Information (all 18)
    OTHER rpl13 GENE PAGES
  • Gene:378961 (1)
  • VEGA:OTTDARG00000035381 (1)
  • Ensembl(GRCz10):ENSDARG00000099380 (1)
  • ORTHOLOGY for rpl13 (Chr: 7)
    Species Symbol Chromosome Accession # Evidence
    Human RPL13 16
  • Gene:6137
  • OMIM:113703
  • HGNC:10303
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Rpl13 8
  • MGI:105922
  • Gene:270106
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (41)