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ZIRC
ZFIN ID: ZDB-GENE-031007-1
Gene Name: ribosomal protein L13
Gene Symbol: rpl13
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:92272 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of ribosome; involved in regulation of cell cycle; predicted to localize to the cytosolic large ribosomal subunit; orthologous to human RPL13 (ribosomal  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6910738]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1016Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa638 Point Mutation Unknown Premature Stop ENU
    DISEASE ASSOCIATED WITH rpl13 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rpl13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of cell cycle (more)
    Cellular Component ribosome (more)
    Molecular Function structural constituent of ribosome (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001380 (1)
  • InterPro:IPR018256 (1)
  • PROSITE:PS01104 (1)
  • Pfam:PF01294 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rpl13-003 (1) 581
    mRNA rpl13-202 (1) 1383
    rpl13-203 (1) 658
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpl13 No data available
    MARKER RELATIONSHIPS
    rpl13Contained in: [BAC] CH73-352P16 (1) (order this)
    [Fosmid] CH1073-68F2 (1) (order this)
    rpl13Encodes: [EST] IMAGE:6910738 (1) (order this)
    [cDNA] MGC:92272 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198143 (1) 663bp
    Genomic GenBank:CU683900 (1) 61935bp
    Select Tool
    Polypeptide UniProtKB:Q90Z10 (1) 211aa
    Sequence Clusters UniGene:75569 (1)
    Sequence Information (all 19)
    ORTHOLOGY for rpl13 (Chr: 7)
    CITATIONS (52)