Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-031007-1
Gene Name: ribosomal protein L13
Gene Symbol: rpl13
Previous Name: zgc:92272 (1)
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6910738]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 4 genotypes
Alleles: hi1016Tg
PHENOTYPE
Data: 3 figures from 3 publications
Observed in: central nervous system, extension, eye, fourth ventricle (all 13) expand
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of cell cycle (more)
Cellular Component intracellular (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001380 (1)
  • InterPro:IPR018256 (1)
  • PROSITE:PS01104 (1)
  • Pfam:PF01294 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpl13-001 (1) 1383
    rpl13-002 (1) 658
    ncRNA rpl13-003 (1) 581
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rpl13 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    rpl13 Contained in: [BAC] CH73-352P16 (1) (order this)
    [Fosmid] CH1073-68F2 (1) (order this)
    rpl13 Encodes: [EST] IMAGE:6910738 (1) (order this)
    [cDNA] MGC:92272 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198143 (1) 663 bp
    Genomic GenBank:CU683900 (1) 61935 bp
    Select Tool
    Polypeptide UniProtKB:Q90Z10 (1) 211 aa
    Sequence Clusters UniGene:75569 (1)
    Sequence Information (all 18)
    OTHER rpl13 GENE PAGES
  • Gene:378961 (1)
  • VEGA:OTTDARG00000035381 (1)
  • Ensembl(Zv9):ENSDARG00000030585 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish rpl13 7  
    Human RPL13 16 (16q24.3|17p11.2)
  • OMIM:113703
  • Gene:6137
  • Mouse Rpl13 8 ( 72.05 cM)
  • MGI:105922
  • Gene:270106
  • Orthology Details
    CITATIONS (32)