ZFIN ID: ZDB-GENE-030925-29
Gene Name: ATPase plasma membrane Ca2+ transporting 1a
Gene Symbol: atp2b1a    Nomenclature History

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Previous Names: pmca1a (1), sb:cb801, si:dkey-18o7.1, wu:fe47b06, wu:fi41d01

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have PDZ domain binding activity and calcium transmembrane transporter activity, phosphorylative mechanism. Involved in animal organ development and sensory perception of sound. Predicted to localize to intracellular membrane-bounded organelle. Is expressed in several structures, including digestive system; hematopoietic system; midbrain neural tube; nervous system; and pleuroperitoneal region. Orthologous to human ATP2B1 (ATPase plasma membrane Ca2+ transporting 1).
Genome Resources: Alliance (1),  Gene:378746 (1),  Ensembl(GRCz11):ENSDARG00000012684 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33434 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40264 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-atp2b1a N/A 1
    MO2-atp2b1a N/A 2
    DISEASE ASSOCIATED WITH atp2b1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp2b1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bone mineralization (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATP binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atp2b1a-201 (1)    Ensembl 5951
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp2b1a No data available
    MARKER RELATIONSHIPS
    atp2b1a Contained in: [BAC] DKEY-18O7 (1) (order this)
    atp2b1a Encodes: [EST] cb801 (1) (order this), fe47b06 (1), fi41d01 (1), fq35e10 (1) (order this), IMAGE:7139107 (1), IMAGE:7165930 (1)
    [cDNA] MGC:198349 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001044757 (1) 5951 nt
    Genomic GenBank:BX649423 (1) 182374 nt
    Select Tool
    Polypeptide UniProtKB:F6PDY7 (1) 1228 aa
    Sequence Information (all 46)
    ORTHOLOGY for atp2b1a ( Chr: 4 )
    CITATIONS (36)