ZFIN ID: ZDB-GENE-030925-15
Gene Name: arrestin domain containing 1a
Gene Symbol: arrdc1a
Sequence Ontology ID : SO:0000704

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Previous Names: arrdc1, sb:cb786 (1), si:rp71-1o1.5 (1), wu:fc25g09 (1), wu:fi04h05 (1), zgc:92248

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2001 [cb786]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Hatching:Long-pec (48.0h-60.0h)
  ectoderm, gut, lateral line system, olfactory placode (all 13) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6981 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arrdc1a HUMAN ORTHOLOGNo data available
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011021
  • InterPro:IPR011022
  • InterPro:IPR014752 (1)
  • InterPro:IPR014756
  • Pfam:PF00339
  • Pfam:PF02752
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arrdc1a-001 (1) 2028
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arrdc1a No data available
    MARKER RELATIONSHIPS
    arrdc1aContained in: [BAC] RP71-1O1 (order this)
    arrdc1aEncodes: [EST] cb786 (1) (order this), fc25g09, fi04h05
    [cDNA] MGC:92248 (1) (order this), MGC:113850 (1), MGC:173793 (1) (order this), MGC:192903 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004561 (1) 2028bp
    Genomic GenBank:AL831768 (1) 149457bp
    Select Tool
    Polypeptide UniProtKB:Q4V9C1 445aa
    Sequence Clusters UniGene:3839 (1)
    Sequence Information (all 36)
    OTHER arrdc1a GENE PAGES
  • Alliance (1)
  • Gene:100006005 (1)
  • VEGA:OTTDARG00000002167 (1)
  • Ensembl(GRCz10):ENSDARG00000068148 (1)
  • ORTHOLOGY for arrdc1a (Chr: 5)
    CITATIONS (20)