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ZIRC
ZFIN ID: ZDB-GENE-030912-15
Gene Name: retinol dehydrogenase 1
Gene Symbol: rdh1
Sequence Ontology ID : SO:0000704

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Previous Name: RDHB (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits retinol dehydrogenase activity. Involved in several processes, including embryonic pectoral fin morphogenesis; pancreas development; and retinoid metabolic process. Predicted to localize to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (4 images) from Thisse et al., 2004 [MGC:56342]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016625Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027054Tg Transgenic Insertion Unknown Unknown DNA
    sa7214 Point Mutation Unknown Splice Site ENU
    sa34767 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rdh1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rdh1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic heart tube development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function retinol dehydrogenase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002347 (1)
  • InterPro:IPR036291 (1)
  • Pfam:PF00106 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rdh1-201 (1) 1816
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rdh1 No data available
    MARKER RELATIONSHIPS
    rdh1Contained in: [BAC] CH211-121K8 (1) (order this)
    rdh1Encodes: [cDNA] MGC:56342 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198069 (1) 1170bp
    Genomic GenBank:BX927361 (1) 177986bp
    Select Tool
    Polypeptide UniProtKB:A0A286Y8B5 (1) 327aa
    Sequence Clusters UniGene:82565 (1)
    Sequence Information (all 14)
    ORTHOLOGY for rdh1 (Chr: 9)
    CITATIONS (27)