ZFIN ID: ZDB-GENE-030827-2
Gene Name: nidogen 2a (osteonidogen)
Gene Symbol: nid2a    Nomenclature History

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Previous Names: nid2, chunp382, fb77a09, fc18d04, im:7144424, wu:fb77a09, wu:fc18d04

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Involved in fin regeneration. Is expressed in several structures, including axis; brain; digestive system; pectoral fin bud; and periderm. Orthologous to human NID2 (nidogen 2).
Genome Resources: Alliance (1),  Gene:322921 (1),  Ensembl(GRCz11):ENSDARG00000075707 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15802 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23022 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25037 Point Mutation Unknown Premature Stop ENU
    sa36357 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44869 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • zju105Tg Transgenic Insertion Unknown Unknown DNA
    zju114 Indel Unknown Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-nid2a
    1
    CRISPR2-nid2a
    1
    CRISPR3-nid2a 1
    MO1-nid2a N/A 2
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH nid2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nid2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process closure of optic fissure (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nid2a-201 (1)    Ensembl 773
    nid2a-202 (1)    Ensembl 5230
    nid2a-203 (1)    Ensembl 814
    nid2a-204 (1)    Ensembl 649
    nid2a-205 (1)    Ensembl 423
    nid2a-206 (1)    Ensembl 838
    nid2a-207 (1)    Ensembl 728
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nid2a No data available
    MARKER RELATIONSHIPS
    nid2a Contained in: [BAC] CH73-32L23 (1), CH211-266O15 (1)
    nid2a Encodes: [EST] fb77a09, fc18d04, IMAGE:7144424 (1)
    nid2a Has Artifact: [EST] fc87b12
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005169847 (1) 5905 nt
    Genomic GenBank:CR774184 (1) 151590 nt
    Select Tool
    Polypeptide UniProtKB:X1WE42 (1) 1576 aa
    Sequence Information (all 37)
    ORTHOLOGY for nid2a ( Chr: 17 )
    CITATIONS (21)