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General Information
ZIRC
ZFIN ID: ZDB-GENE-030825-4
Gene Name: caspase 6, apoptosis-related cysteine peptidase a
Gene Symbol: casp6a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: casp6, caspase-6a (1), zgc:112960

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cysteine-type endopeptidase activity involved in apoptotic process. Predicted to be involved in apoptotic process. Predicted to localize to the cytoplasm. Human ortholog(s) of this  ...
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:112960]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7156719]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1603 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10094 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40102 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH casp6a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH casp6a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process apoptotic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function cysteine-type endopeptidase activity (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA casp6-201 (1) 1578
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM casp6a No data available
    MARKER RELATIONSHIPS
    casp6a Contained in: [BAC] DKEY-18H4 (1) (order this)
    casp6a Encodes: [EST] IMAGE:7156719 (1) (order this)
    [cDNA] MGC:112960 (1) (order this), MGC:191420 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020497 (1) 1599 bp
    Genomic GenBank:CT583642 (1) 117579 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QDS2 (1) 298 aa
    Sequence Clusters UniGene:79640 (1)
    Sequence Information (all 21)
    ORTHOLOGY for casp6a ( Chr: 3 )
    CITATIONS (32)