ZFIN ID: ZDB-GENE-030804-11
Gene Name: lamin B receptor
Gene Symbol: lbr
Sequence Ontology ID : SO:0000704

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Previous Names: sb:cb406, wu:fb75h08, wu:fc47b04, wu:fd36b07, zgc:86649

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2001 [cb406]
  6 figures (16 images) from Rauch et al., 2003 [fb83h10]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  brain, central nervous system, head mesenchyme, hindbrain (all 17) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15675 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-lbr (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lbr HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Pelger-Huet anomaly Pelger-Huet anomaly 169400
    Greenberg skeletal dysplasia 215140
    ?Reynolds syndrome 613471
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell migration involved in gastrulation (more)
    Cellular Component nuclear inner membrane (more)
    Molecular Function oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001171
  • InterPro:IPR018083
  • InterPro:IPR019023
  • PROSITE:PS01017
  • PROSITE:PS01018
  • Pfam:PF01222
  • Pfam:PF09465
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lbr-001 (1) 3082
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lbr No data available
    MARKER RELATIONSHIPS
    lbrContained in: [BAC] DKEY-1J5 (1) (order this)
    lbrContains: [SNP] rs3727636 (1), rs3727793 (1), rs3727794 (1)
    lbrEncodes: [EST] cb406 (1) (order this), fb75h08, fb83h10 (1) (order this), fc47b04, fd36b07
    [cDNA] MGC:86649 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002720 (1) 2475bp
    Genomic GenBank:BX000468 (1) 208583bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5RJ97 619aa
    Sequence Clusters UniGene:21958 (1)
    Sequence Information (all 25)
    OTHER lbr GENE PAGES
  • Gene:368360 (1)
  • VEGA:OTTDARG00000005684 (1)
  • Ensembl(GRCz10):ENSDARG00000014013 (1)
  • ORTHOLOGY for lbr (Chr: 20)
    CITATIONS (21)