ZFIN ID: ZDB-GENE-030729-18
Gene Name: spermatid perinuclear RNA binding protein
Gene Symbol: strbp
Sequence Ontology ID : SO:0000704

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Previous Names: sb:cb627 (1), si:ch211-232m7.1 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have double-stranded RNA binding activity and single-stranded RNA binding activity; predicted to be involved in spermatogenesis; predicted to localize to the nucleus; orthologous to  ...
GENE EXPRESSION
All Expression Data: 6 figures from 2 publications
Directly Submitted Expression Data: 5 figures (17 images) from Thisse et al., 2001 [cb627]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1941 Point Mutation Unknown Premature Stop ENU
sa27567 Point Mutation Unknown Splice Site ENU
sa34854 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34855 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41598 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH strbp HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH strbp VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process spermatogenesis (more)
    Molecular Function RNA binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006561 (1)
  • InterPro:IPR014720 (1)
  • InterPro:IPR030446 (1)
  • PROSITE:PS50137 (1)
  • PROSITE:PS51703 (1)
  • Pfam:PF00035 (1)
  • Pfam:PF07528 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA strbp-002 (1) 465
    mRNA strbp-201 (1) 2396
    strbp-203 (1) 757
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM strbp No data available
    MARKER RELATIONSHIPS
    strbpContained in: [BAC] CH211-232M7 (1) (order this), DKEY-38M20 (1) (order this)
    strbpEncodes: [EST] cb627 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005155603 (1)
    Genomic RefSeq:NW_018394771 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:F1QB35 (1) 690aa
    Sequence Clusters UniGene:134389 (1)
    Sequence Information (all 60)
    OTHER strbp GENE PAGES
  • Alliance (1)
  • Gene:557957 (1)
  • VEGA:OTTDARG00000030928 (1)
  • Ensembl(GRCz11):ENSDARG00000021455 (2)
  • ORTHOLOGY for strbp (Chr: 10)
    CITATIONS (19)