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ZIRC
ZFIN ID: ZDB-GENE-030724-1
Gene Name: sarcoglycan, epsilon
Gene Symbol: sgce
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:92318

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity. Predicted to localize to the sarcoglycan complex. Human ortholog(s) of this gene implicated in myoclonic dystonia. Orthologous to human SGCE  ...
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (11 images) from Thisse et al., 2004 [IMAGE:7150624]
  4 figures (6 images) from Thisse et al., 2004 [IMAGE:6900114]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23581 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36898 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sgce HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    myoclonic dystonia 11 Dystonia-11, myoclonic 159900
    DISEASE ASSOCIATED WITH sgce VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process membrane organization (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sgce-201 (1) 1716
    sgce-202 (1) 695
    sgce-203 (1) 821
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sgce No data available
    MARKER RELATIONSHIPS
    sgceContained in: [BAC] DKEY-104M9 (1) (order this), RP71-57J15 (1) (order this)
    sgceEncodes: [EST] IMAGE:6900114 (1) (order this), IMAGE:7150624 (1) (order this)
    [cDNA] MGC:92318 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002594 (1) 1671bp
    Genomic GenBank:BX510640 (1) 139917bp
    Select Tool
    Polypeptide UniProtKB:Q6DHH1 (1) 414aa
    Sequence Clusters UniGene:78975 (1)
    Sequence Information (all 28)
    ORTHOLOGY for sgce (Chr: 19)
    CITATIONS (25)